[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 54 items for (author: arenz & s)

EMDB-41370:
Structure of a class A GPCR/Fab complex
Method: single particle / : Sun D, Johnson M, Masureel M

EMDB-41827:
Structure of a class A GPCR/agonist complex (focused map2)
Method: single particle / : Sun D, Johnson M, Masureel M

EMDB-41828:
Structure of a class A GPCR/agonist complex (focused map1)
Method: single particle / : Sun D, Johnson M, Masureel M

EMDB-41829:
Structure of a class A GPCR/agonist complex
Method: single particle / : Sun D, Johnson M, Masureel M

EMDB-41850:
Structure of a class A GPCR/agonist complex (Consensus map)
Method: single particle / : Sun D, Johnson M, Masureel M

PDB-8tlm:
Structure of a class A GPCR/Fab complex
Method: single particle / : Sun D, Johnson M, Masureel M

PDB-8u1u:
Structure of a class A GPCR/agonist complex
Method: single particle / : Sun D, Johnson M, Masureel M

EMDB-15905:
Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
Method: single particle / : Koller TO, Graf M, Wilson DN

PDB-8b7y:
Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
Method: single particle / : Koller TO, Graf M, Wilson DN

EMDB-14121:
Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.
Method: single particle / : Koller TO, Beckert B, Wilson DN

PDB-7qq3:
Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.
Method: single particle / : Koller TO, Beckert B, Wilson DN

EMDB-12574:
Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA
Method: single particle / : Beckert B, Wilson DN

PDB-7nsp:
Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA
Method: single particle / : Beckert B, Wilson DN

EMDB-24195:
Complex structure of HIV superinfection Fab QA013.2 and BG505.SOSIP.664
Method: single particle / : Mangala Prasad V, Shipley MM, Overbaugh JM, Lee KK

PDB-7n65:
Complex structure of HIV superinfection Fab QA013.2 and BG505.SOSIP.664
Method: single particle / : Mangala Prasad V, Shipley MM, Overbaugh JM, Lee KK

EMDB-12573:
Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA
Method: single particle / : Beckert B, Wilson DN

EMDB-12575:
Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA
Method: single particle / : Beckert B, Wilson DN

PDB-7nso:
Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA
Method: single particle / : Beckert B, Wilson DN

PDB-7nsq:
Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA
Method: single particle / : Beckert B, Wilson DN

EMDB-7471:
QA013.2 Fab fragment bound to BG505 T332N SOSIP.664 trimer
Method: single particle / : Williams JA, Lee KK

EMDB-3898:
Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P
Method: single particle / : Huter P, Arenz S, Wilson DN

EMDB-3899:
Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)
Method: single particle / : Huter P, Wilson DN

EMDB-3900:
Polyproline stalled ribosome without EF-P
Method: single particle / : Huter P, Arenz S, Wilson DW

EMDB-3901:
Polyproline-stalled ribosome with distorted A-site and P-site tRNA
Method: single particle / : Huter P, Arenz S, Wilson DN

EMDB-3902:
Polyproline-stalled ribosome with a truncated mRNA in the A-site.
Method: single particle / : Huter P, Arenz S, Wilson D

EMDB-3903:
Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)
Method: single particle / : Huter P, Arenz S, Wilson DN

PDB-6enf:
Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P
Method: single particle / : Huter P, Arenz S, Wilson DN

PDB-6enj:
Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)
Method: single particle / : Huter P, Wilson DN

PDB-6enu:
Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)
Method: single particle / : Huter P, Arenz S, Wilson DN

EMDB-3656:
Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.
Method: single particle / : Beckert B, Abdelshahid M, Schaefer H, Steinchen W, Arenz S, Berninghausen O, Beckmann R, Bange G, Turgay K, Wilson DN

PDB-5njt:
Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.
Method: single particle / : Beckert B, Abdelshahid M, Schaefer H, Steinchen W, Arenz S, Berninghausen O, Beckmann R, Bange G, Turgay K, Wilson DN

EMDB-3664:
Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.
Method: single particle / : Beckert B, Abdelshahid M, Schafer H, Steinchen W, Arenz S, Berninghausen O, Beckmann R, Bange G, Turgay K, Wilson DN

EMDB-3525:
Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions
Method: single particle / : Graf M, Arenz S, Huter P, Doenhoefer A, Novacek J, Wilson DN

EMDB-3526:
Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions
Method: single particle / : Graf M, Wilson D

PDB-5mlc:
Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions
Method: single particle / : Graf M, Arenz S, Huter P, Doenhoefer A, Novacek J, Wilson DN

EMDB-3508:
Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs
Method: single particle / : Huter P, Mueller C, Beckert B, Arenz S, Berninghausen O, Beckmann R, Wilson ND

PDB-5mgp:
Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs
Method: single particle / : Huter P, Mueller C, Beckert B, Arenz S, Berninghausen O, Beckmann R, Wilson ND

EMDB-8237:
Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution
Method: single particle / : Arenz S, Juette MF, Graf M, Nguyen F, Huter P, Polikanov YS, Blanchard SC, Wilson DN

EMDB-8238:
Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution
Method: single particle / : Arenz S, Juette MF, Graf M, Nguyen F, Huter P, Polikanov YS, Blanchard SC, Wilson DN

PDB-5kcr:
Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution
Method: single particle / : Arenz S, Juette MF, Graf M, Nguyen F, Huter P, Polikanov YS, Blanchard SC, Wilson DN

PDB-5kcs:
Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution
Method: single particle / : Arenz S, Juette MF, Graf M, Nguyen F, Huter P, Polikanov YS, Blanchard SC, Wilson DN

EMDB-8175:
Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA
Method: single particle / : Arenz S, Bock LV, Graf M, Innis CA, Beckmann R, Grubmueller H, Vaiana AC, Wilson DN

EMDB-8176:
Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA
Method: single particle / : Arenz S, Bock LV, Graf M, Innis CA, Beckmann R, Grubmueller H, Vaiana AC, Wilson DN

PDB-5jte:
Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA
Method: single particle / : Arenz S, Bock LV, Graf M, Innis CA, Beckmann R, Grubmueller H, Vaiana AC, Wilson DN

PDB-5ju8:
Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA
Method: single particle / : Arenz S, Bock LV, Graf M, Innis CA, Beckmann R, Grubmueller H, Vaiana AC, Wilson DN

EMDB-4001:
Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex
Method: single particle / : Arenz S, Wilson DN

PDB-5l3p:
Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex
Method: single particle / : Arenz S, Wilson DN

EMDB-6311:
Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E. coli ribosome
Method: single particle / : Arenz S, Nguyen F, Beckmann R, Wilson DN

PDB-3j9y:
Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome
Method: single particle / : Arenz S, Nguyen F, Beckmann R, Wilson DN

EMDB-6211:
Cryo-EM structure of ribosomal protein S1 on the ribosome
Method: single particle / : Byrgazov K, Grishkovskaya I, Arenz S, Coudevylle N, Temmel H, Wilson DN, Djinovic-Carugo K, Moll I

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more